Plant GARDEN
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TOP > About the Species(Nicotiana tabacum var. TN90) > genome data >Gene sequences

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SNP Detection
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Data List

All Markers Trait-Related Loci
Nicotiana tabacum

CDS Sequence

CDS ID

lcl|NW_015918461.1_cds_XP_016467890.1_60591
CDS Infomation

[gene=LOC107790481] [db_xref=GeneID:107790481] [protein=transcription factor TGA1-like] [protein_id=XP_016467890.1] [location=join(42345..42509,42595..42672,42834..42893,42995..43072,43181..43238,44281..44552,45253..45480,45866..46018)] [gbkey=CDS]
Sequence

ATGAACATGACTTCTCCAACAACTCAGTTTGCACCCACAAGAAGGATGGGTATATATGAA
CCGTTTCACCAGATGAGCGTGTGGGAAGACGCATTTAGAGGTGACATTATGCCTAGCTCT
GATCCATGTATGGTTTCACAGCCAAACGACAGGCCAGACGACAAGTCGGGATATACGTCT
GGGGAACAACATATGCCCTCTGGCTCTGGGGATAATCAAGCACCGAGGAGTACTTCAGAA
AAGGTACAACGACGTTTAGCACAAAATCGTGAAGCTGCGCGTAAAAGTCGTATGCGGAAA
AAGGCTTATGTTCAGCAGCTGGAAACAAGCCGTTTGAAGTTGGCCCAACTTGAGTTAGAG
CTCGAGAGAGCTAGACAGCAGGGACTATACATGTTAGGTTCAAATAGTAATATGGGGCTA
CTCGGAACAATTAATCCAGGAATAGCTGCATTTGAGATGGAATACAGTCATTGGGTTGAA
GAGCAACAGAAAAAGAATGCAGAATTGCGGAGTATTTTGCAGTCTCCTGTAAGCGAAATG
GAGCTTCAATTGCTGGTAGAAAATGTCTTAAGCCACTATTTCAATCTCTTCCGCATGAAA
GCTGACGCCGCCAAGGCTGATGTGTTTTACTTAATGTCTGGGATGTGGAGAACAACCGTG
GAGCGCTTTTTCCTCTGGATTGGAGGATTCAAGCCATCAGATCTCATAAATGTGGTGATG
CCACAACTCGAGCCTTTGACCGATCAGCAAATCATTAAAGTCTGTAATCTGCGACACTGT
TGCCAGCAGGCAGAAGATGCTCTCACACAGGGAATGGATAAACTTCAGCAGACTCTGGCC
CAGAGCATCCTAAATATGACCACAGGAGCTGGAAATTACAGTTCCCAAATGGTTTCTTCT
ATGGAAAATTTGGAAGCATTGGAGAGCTTTGTTAACCAGGCGGATCACCTACGCCAACAA
ACACTACAGCAAATGTCTATTATTTTGACAACACGCCAAGCAGCTAGGGGCTTACTTGCT
TTCGGAGAGTATCTTCAACGTCTTCGTGCTCTGAGTTCACTCTGGGCTGCCCGTCCTCGT
GAACCAACTTAA

Peptide Sequence

PEP ID

XP_016467890.1
PEP Infomation

PREDICTED: transcription factor TGA1-like [Nicotiana tabacum]
Sequence

MNMTSPTTQFAPTRRMGIYEPFHQMSVWEDAFRGDIMPSSDPCMVSQPNDRPDDKSGYTS
GEQHMPSGSGDNQAPRSTSEKVQRRLAQNREAARKSRMRKKAYVQQLETSRLKLAQLELE
LERARQQGLYMLGSNSNMGLLGTINPGIAAFEMEYSHWVEEQQKKNAELRSILQSPVSEM
ELQLLVENVLSHYFNLFRMKADAAKADVFYLMSGMWRTTVERFFLWIGGFKPSDLINVVM
PQLEPLTDQQIIKVCNLRHCCQQAEDALTQGMDKLQQTLAQSILNMTTGAGNYSSQMVSS
MENLEALESFVNQADHLRQQTLQQMSIILTTRQAARGLLAFGEYLQRLRALSSLWAARPR
EPT

Transcript Sequence

Gene sequence data has not been registered.